We have generated a panel of cell lines in which the amount of APP and of accessory factors can be varied. These novel cell lines are important research tools that have since been applied to produce quantitative data. The quantitative dose-response series have been used to estimate reaction constants of mathematical models describing APP processing. We have established nonlinear ordinary differential equation models describing the cleavage of APP by alpha and beta secretases, and the influence of SORLA herein. We have queried different mathematical models concerning the interactions with SORLA and we have simplified the models based on justifiable steady state approximations. For the resulting algebraic models, we have estimated the model parameters from the dose-response curves by nonlinear optimization methods.

These results provide the bases for further modelling of neurodegenerative processes and for determination of individual risk of AD.

Illustrations of Networks regulating APP processing and down-stream signalling processes leading to neuronal cell death or survival, transcription regulation and neurodegeneration (Dotted lines indicate unknown interactions).

Network diagram of APP processing and its influence by cellular compartmentalization and by factors such as SORLA and trafficking adaptors GGA, PACS1, and retromer complex.

See the project's poster at HASB midterm review 2010.