Dept. of Systems Biology and Bioinformatics is a part of the University of Rostock, Germany Universität Rostock

Theses

PhD theses

Schmitz U
An investigation of microRNA target regulation mechanisms using an integrative approach

2015

Strunz S
Transcriptional Responses to Radiation Exposure Facilitate the Discovery of Biomarkers Functioning as Radiation Biodosimeters

2014

Schmitz Y
Compartmental Modelling of the Wnt pathway

2014

Lange F
Characterisation of Signalling Pathways of pancreatic epithelial and cancer tissue using systems biology

2013

Liebal U
Regulation of the general stress response of Bacillus subtilis

2013

Lao A
A Systems Biology Approach to Understand the Influence of SORLA on Amyloidogenic Processing in Alzheimer's Disease

2013

Lai X
A systems biology approach to unravel the cellular function of microRNAs

2012

Frey S
A systems biology approach to dynamic modelling of the AMP-activated kinase pathway

2011

Ullah M
Stochastic Modelling of Subcellular Biochemical Systems

2009

Nuñez J
Random set theory applied to the forecasting of stochastic point processes

2002

Master theses

Berger C
Analysis of the carbon flow in response to iron supply in Clostridium acetobutylicum

2012

Daniar R
Cloud based analysis of Health Data with RESTful Web Services

2012

Krey T
Effect of enzyme-complexes on the efficiency of metabolic pathways

2012

Arumugam U
Adaptation in networks of heterogeneous mitochondrial populations

2012

Khan FM
Detection of potential drug targets in cancer signaling by mathematical modelling and optimization

2012

Blitti A
Computational identification of ADAR editing sites in microRNA precursors

2012

Asim Anees
Stochastic Modelling and Simulations: An Extended Crossover method for modelling noise in stiff/bistable biochemical systems.

Electrical Engineering, 2011

Freiesleben S
Investigation of mammalian microRNA biogenesis by use of mathematical modeling

2011

Shah AF
Data Mining and Clustering in Model Calibration for Systems Biology

2009

Lai X
Mathematical modelling and mathematical optimisation of biochemical systems: a method of analysis in biotechnology and biomedicine

2007

Sun C
Development of a SBToolbox module to analyse Power-Law Models

2006

Kutalik Z
Significance Analysis for Microarray Data

2003

Diplomarbeiten

Krause M
Optimierung von Stimulusprofilen zellbiologischer Experimente durch mathematische Modellierung

2010

Haufschild M
Biological Aging, Negligible Senescence and the Concept of Renewal: A Complex Systems Approach by Memory Evolutive Systems

2010

Hälke R
Versioning Concepts and Technologies for Biochemical Simulation Models

2010

Raasch P
A JAVA framework to integrate ncRNA detection methods

2008

Pauleweit S
Simulation der Messung eines Cell Monitoring Systems (Modellbildung und Parameterschätzung)

2008

Drews G
Erstellung eines Parameter Estimation Frameworks für die Systems Biology Toolbox for Matlab

2007

Bittig A
Combined Visualisation of Pathway and Protein-Protein Interaction Data

2006

Weber I
Zur Bestimmung sequenzabhängiger Zusammenhänge zwischen Transkriptom und Proteom

2004

Studienarbeiten

Tom Gebhardt
Visualising sub-networks in SBML models

2015

further information at the SEMS Webpage.

Fabienne Lambusch
Classifying reactions of computational models

2015


Further information at the SEMS webpage.
The thesis is available online (PDF).

Berger C
The impact of iron limitation on growth and product spectrum of Clostridium acetobutylicum

2012

Alm R
Bestimmung von Distanzen zwischen Versionen XML - kodierter biologischer Modelle

2012

Raasch P
Molecular Dynamics Simulation

2007

Oertel Y
Bifurkation analysis of the Hes1 oscillator

2007

Pauleweit S
Ansäuerungsleistung und Sauerstoffverbrauch von Säugetierzellen im extrazellulären Medium

2007

Drews G
Konzipierung und Erstellung eines Interfaces zum Export von Matlab SBmodel Modellen nach SBML

2006

Bittig A
Detektion charakteristischer Muster in Proteininteraktionsnetzwerken

2005